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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Racgap1, Rac GTPase-activating protein 1
Sequence ID:NM_001253808
NM_001253809
NM_012025
Entrez Gene ID:26934
Ensembl ID:ENSMUSG00000023015

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, pooled tissue, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F1|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 99620496 - 99651631


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3602242Full LengthBC010715Rac GTPase-activating protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036155  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001253808 NP_001240737    
NM_001253809 NP_001240738    
NM_012025 NP_036155 Q9WVM1 C1_1
RhoGAP

Related Sequences

 
mRNAGenPeptSwissProt
AF079974 AAD40487 Q9WVM1
AF212320 AAG43539 Q9WVM1
AF212321 AAG43540 Q9WVM1
BC010715 AAH10715 Q9WVM1
AB030252 BAA90248 Q9WVM1
AK144608 BAE25967 Q9WVM1
AK154929 BAE32931 Q9WVM1
AK165897 BAE38446 Q9WVM1
AK166084 BAE38561 Q9WVM1
AK168020 BAE40005 Q9WVM1
AK168025 BAE40010 Q9WVM1
AK168170 BAE40131 Q9WVM1
AK168679 BAE40528 Q9WVM1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Racgap1 NP_036155 R.norvegicus Racgap1 315298   NP_001101582 96
H.sapiens RACGAP1 29127 Gene Info NP_001119575 85
D.melanogaster tum 36538   NP_610912 39
A.gambiae AgaP_AGAP008912 1279880   XP_319660 36
C.elegans cyk-4 176815   NP_499845 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)