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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smarcd1, SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
Sequence ID:NM_031842
Entrez Gene ID:83797
Ensembl ID:ENSMUSG00000023018

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 F1|15 56.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 99704427 - 99713983

 Exon Info From UCSC:
NM_031842

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4481097Full LengthBC026783SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
6810462Full LengthBC079839SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_114030  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031842 NP_114030 Q61466 SWIB

Related Sequences

 
mRNAGenPeptSwissProt
M25773 AAA53377 Q61466
U66620 AAC52794 Q61466
BC026783 AAH26783 Q61466
BC079839 AAH79839 Q68FH8
AK075611 BAC35856 Q61466

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smarcd1 NP_114030 R.norvegicus Smarcd1 363002   NP_001102222 100
H.sapiens SMARCD1 6602 Gene Info NP_003067 99
A.gambiae AgaP_AGAP000923 1270431   XP_309104 70
A.thaliana CHC1 831267   NP_196921 37
A.thaliana AT3G01890 820093   NP_566154 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta