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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Bbox1, butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)
Sequence ID:NM_130452
Entrez Gene ID:170442
Ensembl ID:ENSMUSG00000041660

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E3|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 110262696 - 110305743

NM_130452 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15546110105239110105770
547713110108384110108550
714910110110171110110367
9111016110115715110115820
10171215110132566110132764
12161330110143898110144012
13311642110145570110145881

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5134018Full LengthBC019406butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_569719  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_130452 NP_569719 Q924Y0 EC 1.14.11.1 TauD

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019406 AAH19406 Q924Y0 EC 1.14.11.1
AY033514 AAK54388 Q924Y0 EC 1.14.11.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Bbox1 NP_569719 R.norvegicus Bbox1 64564   NP_072151 98
H.sapiens BBOX1 8424 Gene Info NP_003977 89
D.melanogaster CG5321 32399   NP_572967 40
A.gambiae AgaP_AGAP012477 1269086   XP_307672 38
A.gambiae AgaP_AGAP008246 1277734   XP_317222 38
D.melanogaster CG10814 36481   NP_610868 36
C.elegans gbh-1 174648   NP_496305 35
N.crassa NCU06891 3875410   XP_959238 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)