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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vnn3, vanin 3
Sequence ID:NM_011979
Entrez Gene ID:26464
Ensembl ID:ENSMUSG00000020010

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 A2-B1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 23851471 - 23869841

NM_011979 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13352357126723571601
3364662357171223571842
4676592357600323576195
6609512358414323584434
95213222358543323585803
132314962358689923587072
149718112358933423589648

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40047284Full LengthBC111521vanin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036109  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011979 NP_036109 Q9QZ25 EC 3.5.1.92 CN_hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC111521 AAI11522 Q2T9H5  
AJ132103 CAB59323 Q9QZ25 EC 3.5.1.92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vnn3 NP_036109 R.norvegicus Vnn3 498992   NP_001102606 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)