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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smoc1, SPARC related modular calcium binding 1
Sequence ID:NM_001146217
NM_022316
Entrez Gene ID:64075
Ensembl ID:ENSMUSG00000021136

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 D1|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 81026830 - 81186400

 Exon Info From UCSC:
NM_001146217
NM_022316

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3673732Full LengthBC031804SPARC related modular calcium binding 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071711  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001146217 NP_001139689    
NM_022316 NP_071711   Kazal_1
Thyroglobulin_1
Kazal_2

Related Sequences

 
mRNAGenPeptSwissProt
AF070470 AAD41590 Q8BLY1
BC031804 AAH31804 Q8BLY1
AK040931 BAC30750 Q8BLY1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smoc1 NP_001139689 R.norvegicus Smoc1 314280   NP_001002835 99
H.sapiens SMOC1 64093 Gene Info NP_001030024 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)