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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Tesc, tescalcin
Sequence ID:NM_021344
Entrez Gene ID:57816
Ensembl ID:ENSMUSG00000029359

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 64.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 118027917 - 118061867

NM_021344 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1164118477832118477995
165234118496323118496392
235315118503592118503672
316455118504838118504977
456517118506385118506446
518625118506545118506652
626673118509450118509497
674942118511610118511878

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4237590Full LengthBC019492tescalcin
5290163Full LengthBC107679tescalcin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067319  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_021344 NP_067319 Q9JKL5 efhand

Related Sequences

 
mRNAGenPeptSwissProt
AF234783 AAF40439 Q9JKL5
BC019492 AAH19492 Q9JKL5
BC107679 AAI07680 Q9JKL5
GQ856259 ACX32051 D0EM45
GQ856260 ACX32052 D0EM46
GQ856261 ACX32053 D0EM47

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tesc NP_067319 R.norvegicus Tesc 288689   XP_213790 100
H.sapiens TESC 54997 Gene Info NP_060369 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)