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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tfap4, transcription factor AP4
Sequence ID:NM_031182
Entrez Gene ID:83383
Ensembl ID:ENSMUSG00000005718

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A1|16 2.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 4544660 - 4559720

NM_031182 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1108745446604545746
1088124345472544547409
1244138445493304549470
1385155545512294551399
1556165445517454551843
1655182045519344552099
1821211345594274559719

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6438955Full LengthBC047270transcription factor AP4
6808430Full LengthBC054777transcription factor AP4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112459  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031182 NP_112459 Q9JIZ5 HLH

Related Sequences

 
mRNAGenPeptSwissProt
AF161262 AAF80448 Q9JIZ5
BC047270 AAH47270 Q9JIZ5
BC054777 AAH54777 Q9JIZ5
AK053091 BAC35263 Q8BWA4
AK166424 BAE38767 Q9JIZ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tfap4 NP_112459 R.norvegicus Tfap4 360482   NP_001101737 99
H.sapiens TFAP4 7023 Gene Info NP_003214 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)