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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Znhit1, zinc finger, HIT domain containing 1
Sequence ID:NM_027318
Entrez Gene ID:70103
Ensembl ID:ENSMUSG00000059518

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 G1

Chromosomal Position (from UCSC)

Chromosomal Position:5: 136982195 - 136987521

NM_027318 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1217137458070137458286
218387137458387137458556
388467137458737137458816
468638137460748137460918
6391032137463358137463751

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3153902Full LengthBC026751zinc finger, HIT domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081594  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027318 NP_081594   zf-HIT

Related Sequences

 
mRNAGenPeptSwissProt
BC026751 AAH26751 Q8R331
AK012199 BAB28094 Q8R331
AK080799 BAC38025 Q8R331

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Znhit1 NP_081594 R.norvegicus LOC100360077 100360077   XP_002728003 100
H.sapiens ZNHIT1 10467 Gene Info NP_006340 99
D.melanogaster CG31917 326171   NP_608895 57
A.gambiae AgaP_AGAP007853 1278104   XP_317641 53
C.elegans CD4.7 183878   NP_001122894 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)