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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5
Sequence ID:NM_176942
Entrez Gene ID:110886
Ensembl ID:ENSMUSG00000055078

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7 28.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 57488999 - 57490856

NM_176942 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112416466303864664278
124214536466895564669166
145416066467358964673741
160717506467711264677255
175118336470831464708396
183420546474417164744391
205521226474449664744563
212322446474610964746230
224524046476334864763507
240526746476510964765378

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6815819Full LengthBC062112gamma-aminobutyric acid (GABA-A) receptor, subunit alpha 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_795916  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_176942 NP_795916 Q8BHJ7 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
AF090374 AAC35561 O88964
BC062112 AAH62112 Q8BHJ7
AK038476 BAC30012 Q8BHJ7
AK083185 BAC38799 Q8BHJ7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gabra5 NP_795916 R.norvegicus Gabra5 29707   NP_058991 98
H.sapiens GABRA5 2558 Gene Info NP_000801 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta