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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cog4, component of oligomeric golgi complex 4
Sequence ID:NM_133973
Entrez Gene ID:102339
Ensembl ID:ENSMUSG00000031753

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8 53.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 110847030 - 110848502

 Exon Info From UCSC:
NM_133973

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4161858Full LengthBC023120component of oligomeric golgi complex 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598734  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133973 NP_598734 Q8R1U1 COG4

Related Sequences

 
mRNAGenPeptSwissProt
BC023120 AAH23120 Q8R1U1
AY223866 AAP20648 Q7TSQ9
AK172465 BAE43019 Q8R1U1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cog4 NP_598734 R.norvegicus Cog4 361407   NP_001101919 99
H.sapiens COG4 25839 Gene Info NP_056201 94
D.melanogaster CG7456 34442   NP_609413 41
A.gambiae AgaP_AGAP008875 1279844   XP_552742 40
A.thaliana AT4G01400 827943   NP_001154198 35
C.elegans cogc-4 173518   NP_493966 35
N.crassa NCU11246 5847672   XP_001728368 27
S.cerevisiae COG4 856220   NP_015430 23
S.pombe cog4 2539017   NP_588155 22

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)