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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Smad5, SMAD family member 5
Sequence ID:NM_001164041
NM_001164042
NM_008541
Entrez Gene ID:17129
Ensembl ID:ENSMUSG00000021540

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 B1|13 35.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 56703051 - 56739959

 Exon Info From UCSC:
NM_001164041
NM_001164042
NM_008541

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6490853Full LengthBC050001MAD homolog 5 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032567  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164041 NP_001157513    
NM_001164042 NP_001157514    
NM_008541 NP_032567 P97454 MH1
MH2

Related Sequences

 
mRNAGenPeptSwissProt
U58993 AAB07871 P97454
U77638 AAB39737 P97454
AF063006 AAC83580 P97454
BC048233 AAH48233 Q810W4
BC050001 AAH50001 P97454
AK018077 BAB31063 Q9CRR7
AK082997 BAC38724 P97454

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Smad5 NP_032567 H.sapiens SMAD5 4090 Gene Info NP_001001419 99
R.norvegicus Smad5 59328   NP_067724 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta