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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. H2afy2, H2A histone family, member Y2
Sequence ID:NM_207000
Entrez Gene ID:404634
Ensembl ID:ENSMUSG00000020086

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 B4|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 61738646 - 61783864

NM_207000 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18166120139461202209
8179916120388261204056
99210816120938061209469
108211816121041961210518
118212926121202361212133
129314906121442461214621
149115976121620961216315
159818286122047161220701
182919106124653061246611

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5717897Full LengthBC046794H2A histone family, member Y2
6307273Full LengthBC045140H2A histone family, member Y2
40052731Full LengthBC107279H2A histone family, member Y2
40052733Full LengthBC107280H2A histone family, member Y2
40052734Full LengthBC127144H2A histone family, member Y2
4504346IncompleteBC022725H2A histone family, member Y2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_996883  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_207000 NP_996883 Q8CCK0 Histone
A1pp

Related Sequences

 
mRNAGenPeptSwissProt
BC022725 AAH22725 A0PJB8
BC045140 AAH45140 Q8CCK0
BC046794 AAH46794 Q8CCK0
BC107279 AAI07280 Q8CCK0
BC107280 AAI07281 Q8CCK0
BC127144 AAI27145 Q8CCK0
AF336305 AAK52472 Q8CCK0
AK020744 BAB32199 Q9CTR1
AK032636 BAC27963 Q8CCK0
AK078464 BAC37288 Q8BP16
AK165020 BAE38003 Q8CCK0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus H2afy2 NP_996883 R.norvegicus H2afy2 361844   NP_001129279 100
H.sapiens H2AFY2 55506 Gene Info NP_061119 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)