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Gene Info

Gene Information For:Mm. Cnot7, CCR4-NOT transcription complex, subunit 7
Sequence ID:NM_001271542
NM_001271543
NM_011135
Entrez Gene ID:18983
Ensembl ID:ENSMUSG00000031601

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 A4|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 40492541 - 40511744

Transcript StartTranscript EndChromosomal Start Chromosomal End
110804157838941579468
108111914158115841581268
119213364158464841584792
133714984158610541586266
149916924159280841593001
169329824159536841596657

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3590764Full LengthBC006021CCR4-NOT transcription complex, subunit 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035265  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271542 NP_001258471    
NM_001271543 NP_001258472    
NM_011135 NP_035265 Q60809
Q543X5
CAF1

Related Sequences

 
mRNAGenPeptSwissProt
BC006021 AAH06021 Q60809
Q543X5
AK044535 BAC31969 Q60809
Q543X5
AK132063 BAE20968 Q3V231
AK147048 BAE27634 Q60809
Q543X5
AK166449 BAE38783 Q3TLK9
AK007767 BAE43206 Q3V476

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cnot7 NP_035265 H.sapiens CNOT7 29883 Gene Info NP_037486 100
R.norvegicus Cnot7 306492   NP_001100783 100
A.gambiae AgaP_AGAP011413 1278281   XP_317896 78
D.melanogaster Pop2 39366   NP_729776 75
S.pombe caf1 2539041   NP_588385 57
N.crassa NCU09001 3875151   XP_959029 54
C.elegans ccf-1 176625   NP_499553 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)