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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gtf2h2, general transcription factor II H, polypeptide 2
Sequence ID:NM_022011
Entrez Gene ID:23894
Ensembl ID:ENSMUSG00000021639

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 D1|13 55.9 cM

Chromosomal Position (from UCSC)

Chromosomal Position:13: 100468908 - 100490131

 Exon Info From UCSC:
NM_022011

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4488798Full LengthBC016231general transcription factor II H, polypeptide 2
30047823Full LengthBC053382general transcription factor II H, polypeptide 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_071294  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_022011 NP_071294 Q9JIB4
Q7TPV0
Ssl1
C1_4

Related Sequences

 
mRNAGenPeptSwissProt
BC016231 AAH16231 Q91YN8
BC053382 AAH53382 Q7TPV0
AK078297 BAC37209 Q8C5I2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gtf2h2 NP_071294 R.norvegicus Gtf2h2 294693   NP_001070896 98
H.sapiens GTF2H2 2966 Gene Info NP_001506 97
D.melanogaster Ssl1 40509   NP_649427 52
A.gambiae AgaP_AGAP010559 1275295   XP_314533 52
A.thaliana GTF2H2 839332   NP_683275 46
C.elegans T16H12.4 176421   NP_499239 44
S.pombe ssl1 2539194   NP_587800 43
S.cerevisiae SSL1 850691   NP_013105 42
N.crassa NCU01831 3872762   XP_956615 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)