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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Stx3, Syntaxin 3
Sequence ID:NM_152220
NM_001025307
NM_011502
Entrez Gene ID:20908
Ensembl ID:ENSMUSG00000041488

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 11775403 - 11818909

 Exon Info From UCSC:
NM_152220
NM_001025307
NM_011502

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5357204Full LengthBC024844syntaxin 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035632  NP_689344  NP_001020478  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001025307 NP_001020478 Q8R1B7 Syntaxin
SNARE
NM_011502 NP_035632   Syntaxin
SNARE
NM_152220 NP_689344 Q3TBP0
Q64704
Syntaxin
SNARE

Related Sequences

 
mRNAGenPeptSwissProt
S78677 AAC17462  
S78675 AAC17463  
BC024844 AAH24844 Q8R1B7
S78678 AAP32013  
D29797 BAA06180 Q3TBP0
Q64704
D29798 BAA06181 Q64704
D29799 BAA06182 Q64704
D29800 BAA06183 Q64704
D38375 BAA07454 Q64704
AK038415 BAC29992 Q8CAN1
AK133830 BAE21868 Q3UZI9
AK171135 BAE42269 Q3TBP0
Q64704

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Stx3 NP_689344 R.norvegicus Stx3 81802   NP_112386 100
H.sapiens STX3 6809 Gene Info NP_004168 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)