Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lasp1, LIM and SH3 protein 1
Sequence ID:NM_010688
Entrez Gene ID:16796
Ensembl ID:ENSMUSG00000038366

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C-D|11 56.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 97799671 - 97838762

NM_010688 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11919766098597661175
1922869766813897668232
2873719767701197677095
3724799768615597686262
4806369769485997695015
6377409769539797695500
74134339769738597700077

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3490532Full LengthBC010840LIM and SH3 protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034818  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010688 NP_034818 Q543N3
Q61792
SH3_1
LIM
Nebulin

Related Sequences

 
mRNAGenPeptSwissProt
U58882 AAC52639 Q61792
BC010840 AAH10840 Q543N3
Q61792
AK034404 BAC28696 Q543N3
Q61792
AK049199 BAC33604 Q543N3
Q61792
AK078445 BAC37278 Q543N3
Q61792
AK148858 BAE28681 Q543N3
Q61792
AK154656 BAE32746 Q543N3
Q61792
AK168521 BAE40400 Q543N3
Q61792
AK169381 BAE41128 Q543N3
Q61792
X96973 CAA65659 Q543N3
Q61792
CT010288 CAJ18496 Q543N3
Q61792

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lasp1 NP_034818 R.norvegicus Lasp1 29278   NP_116002 98
H.sapiens LASP1 3927 Gene Info NP_006139 96
A.gambiae AgaP_AGAP006526 5667268   XP_001688892 48
C.elegans F42H10.3 185685   NP_498874 47
D.melanogaster Lasp 39864   NP_730192 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)