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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ncor1, nuclear receptor co-repressor 1
Sequence ID:NM_001252313
NM_011308
NM_177229
Entrez Gene ID:20185
Ensembl ID:ENSMUSG00000018501

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 62316689 - 62376761


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30545994Full LengthBC086657nuclear receptor co-repressor 1
4501757IncompleteBC029627nuclear receptor co-repressor 1
4981672IncompleteBC026623nuclear receptor co-repressor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035438  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001252313 NP_001239242    
NM_011308 NP_035438   Myb_DNA-binding
NM_177229 NP_796203    

Related Sequences

 
mRNAGenPeptSwissProt
U35312 AAB17125 Q60974
U22016 AAC52168 Q60974
BC026623 AAH26623 Q05CF0
BC029627 AAH29627 Q05C35
BC086657 AAH86657 Q5PRE9
L78294 AAL40135 Q8VDE8
AK013831 BAB29007 Q9CUV3
AK077420 BAC36792 Q8BK32
AB093281 BAC41465 Q8CHB6
AK136008 BAE22771 Q3UWZ3
AK137632 BAE23439 Q3UV34
AK137695 BAE23465 Q3UV08

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ncor1 NP_035438 R.norvegicus Ncor1 54299   XP_577103 97
H.sapiens NCOR1 9611 Gene Info NP_006302 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta