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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Eef1b2, Eukaryotic translation elongation factor 1 beta 2
Sequence ID:NM_018796
Entrez Gene ID:55949
Ensembl ID:ENSMUSG00000025967

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C2|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 63177164 - 63179656

NM_018796 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14616322340463223864
4625846322432763224449
5857116322501263225138
7127786322540563225471
7799046322582163225946
90519246322603163227050

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3600850Full LengthBC003899eukaryotic translation elongation factor 1 beta 2
3963930Full LengthBC023139eukaryotic translation elongation factor 1 beta 2
5138088IncompleteBC039635eukaryotic translation elongation factor 1 beta 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061266  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018796 NP_061266 O70251 EF1_GNE

Related Sequences

 
mRNAGenPeptSwissProt
AF029844 AAC13264 O70251
BC003899 AAH03899 O70251
BC023139 AAH23139 O70251
BC039635 AAH39635 O70251
AK012756 BAB28447 O70251
AK027911 BAC25661 O70251
AK168191 BAE40151 O70251

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Eef1b2 NP_061266 R.norvegicus Eef1b2 363241   NP_001102269 98
H.sapiens EEF1B2 1933 Gene Info NP_066944 96
A.gambiae AgaP_AGAP010613 3291128   XP_558148 62
A.gambiae AgaP_AGAP010612 1275337   XP_314575 62
D.melanogaster Ef1beta 45249   NP_524808 60
S.pombe tef5 2539275   NP_588303 60
N.crassa NCU06035 3875763   XP_959625 58
S.cerevisiae EFB1 851260   NP_009398 55
C.elegans F54H12.6 176120   NP_498737 55
A.thaliana AT5G19510 832071   NP_568375 52
A.thaliana AT5G12110 831084   NP_196772 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)