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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Psph, phosphoserine phosphatase
Sequence ID:NM_133900
Entrez Gene ID:100678
Ensembl ID:ENSMUSG00000029446

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G1.3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 129765563 - 129787204

NM_133900 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
18358130271433130271773
359507130272294130272442
508653130275114130275259
654788130276481130276615
789945130277351130277507
9461172130284897130285123
11731255130285237130285319
12561554130292830130293128

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3493291Full LengthBC002251phosphoserine phosphatase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598661  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_133900 NP_598661 Q99LS3 EC 3.1.3.3 Hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002251 AAH02251 Q99LS3 EC 3.1.3.3
AK088865 BAC40622 Q99LS3 EC 3.1.3.3
AK168048 BAE40030 Q99LS3 EC 3.1.3.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Psph NP_598661 R.norvegicus Psph 304429   NP_001009679 99
H.sapiens PSPH 5723 Gene Info NP_004568 94
C.elegans Y62E10A.13 178304   NP_502581 52
A.gambiae AgaP_AGAP012247 1280442   XP_320295 50
A.thaliana PSP 838445   NP_973858 50
D.melanogaster aay 39085   NP_524001 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)