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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Phf5a, PHD finger protein 5A
Sequence ID:NM_026737
Entrez Gene ID:68479
Ensembl ID:ENSMUSG00000061360

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E|15

Chromosomal Position (from UCSC)

Chromosomal Position:15: 81865320 - 81871908

NM_026737 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113778169494581696321
137815448170076181700927
154515688170159581701618
156916488170224281702321

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4235469Full LengthBC025161PHD finger protein 5A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081013  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026737 NP_081013 P83870 PHF5

Related Sequences

 
mRNAGenPeptSwissProt
BC025161 AAH25161 P83870
AF479288 AAM49736 P83870
AK003520 BAB22833 P83870
AK143590 BAE25453 P83870
AK163247 BAE37255 P83870
AK167932 BAE39936 P83870
AK167955 BAE39955 P83870

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Phf5a NP_081013 R.norvegicus Phf5a 192246   NP_620243 100
H.sapiens PHF5A 84844 Gene Info NP_116147 100
A.gambiae AgaP_AGAP009905 1279319   XP_319026 98
D.melanogaster CG9548 33909   NP_609038 96
A.thaliana AT1G07170 837228   NP_001077473 93
A.thaliana AT2G30000 817551   NP_565691 93
C.elegans phf-5 3564851   NP_001022909 91
N.crassa NCU00348 3873869   XP_957819 75
S.pombe ini1 2541843   NP_593792 70
S.cerevisiae RDS3 856209   NP_015419 57

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)