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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Galnt10, UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10
Sequence ID:NM_134189
Entrez Gene ID:171212
Ensembl ID:ENSMUSG00000020520

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 57785100 - 57787498

 Exon Info From UCSC:
NM_134189

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3595220Full LengthBC016585UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10
6836791Full LengthBC060617UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598950  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_134189 NP_598950 Q6P9S7
Q5SQF9
EC 2.4.1.41 Glycos_transf_2
Ricin_B_lectin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC016585 AAH16585 Q6P9S7 EC 2.4.1.41
BC060617 AAH60617 Q6P9S7
Q5SQF9
EC 2.4.1.41
AK033515 BAC28334 Q6P9S7 EC 2.4.1.41
AK131155 BAD21405 Q6P9S7 EC 2.4.1.41
AK159088 BAE34806 Q3TXV9  
AK159362 BAE35020 Q6P9S7
Q5SQF9
EC 2.4.1.41
AK172609 BAE43090 Q5ST18  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Galnt10 NP_598950 R.norvegicus Galnt10 170501   NP_570098 98
H.sapiens GALNT10 55568 Gene Info NP_938080 95
C.elegans gly-10 178343   NP_001041036 53
D.melanogaster pgant6 38346   NP_647749 53
A.gambiae AgaP_AGAP012414 1280301   XP_320141 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)