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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Barhl2, BarH-like 2 (Drosophila)
Sequence ID:NM_001005477
Entrez Gene ID:104382
Ensembl ID:ENSMUSG00000034384

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E5|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 106452584 - 106458166

NM_001005477 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
161162106881541106882687
11631388106884468106884693
13892329106886244106887184

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5688311Full LengthBC078444BarH-like 2 (Drosophila)
6409990IncompleteBC055789BarH-like 2 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001005477  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001005477 NP_001005477 Q8VIB5 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC055789 AAH55789 Q7TNS3
BC078444 AAH78444 Q8VIB5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Barhl2 NP_001005477 R.norvegicus Barhl2 65050   NP_075245 99
H.sapiens BARHL2 343472 Gene Info NP_064447 94
C.elegans ceh-30 191620   NP_508524 50
C.elegans ceh-31 191621   NP_508525 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)