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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Vnn1, vanin 1
Sequence ID:NM_011704
Entrez Gene ID:22361
Ensembl ID:ENSMUSG00000037440

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10|10 A1-B2

Chromosomal Position (from UCSC)

Chromosomal Position:10: 23894859 - 23905339

NM_011704 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14042361449323614896
4055352361709823617228
5367282361821323618405
72910202361919923619490
102113792362039023620748
138015502362319123623361
155124162362428323625148

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5041670Full LengthBC019203vanin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035834  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011704 NP_035834 Q9Z0K8 EC 3.5.1.92 CN_hydrolase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019203 AAH19203 Q9Z0K8 EC 3.5.1.92
AK002773 BAB22347 Q9Z0K8 EC 3.5.1.92
AK145984 BAE26806 Q9Z0K8 EC 3.5.1.92
AK149485 BAE28911 Q3UEK0  
AK167427 BAE39515 Q9Z0K8 EC 3.5.1.92
AJ132098 CAA10567 Q9Z0K8 EC 3.5.1.92

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vnn1 NP_035834 R.norvegicus Vnn1 29142   NP_001020794 92
H.sapiens VNN1 8876 Gene Info NP_004657 76
D.melanogaster CG32750 326238   NP_727067 30

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)