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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Arl8b, ADP-ribosylation factor-like 8B
Sequence ID:NM_026011
Entrez Gene ID:67166
Ensembl ID:ENSMUSG00000030105

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E2|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 108783254 - 108821552

NM_026011 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1319108733052108733370
320400108763620108763700
401474108764977108765050
475568108765251108765344
569636108768238108768305
637707108768536108768606
7082928108771496108773716

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3983809Full LengthBC013719ADP-ribosylation factor-like 8B
4238820IncompleteBC022675ADP-ribosylation factor-like 8B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080287  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026011 NP_080287 Q9CQW2 Arf

Related Sequences

 
mRNAGenPeptSwissProt
BC013719 AAH13719 Q9CQW2
AK005999 BAB24358 Q9DAB3
AK009279 BAB26190 Q9CQW2
AK012024 BAB27980 Q9CQW2
AK030689 BAC27079 Q9CQW2
AB185206 BAD30090 Q9CQW2
AK144177 BAE25749 Q9CQW2
AK146307 BAE27063 Q9CQW2
AK149822 BAE29104 Q9CQW2
AK151036 BAE30053 Q9CQW2
AK152798 BAE31503 Q9CQW2
AK159311 BAE34979 Q9CQW2
AK159348 BAE35010 Q9CQW2
AK169929 BAE41467 Q9CQW2
AK170645 BAE41932 Q9CQW2
CT010337 CAJ18545 Q9CQW2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arl8b NP_080287 H.sapiens ARL8B 55207 Gene Info NP_060654 100
R.norvegicus Arl8b 500282   NP_001019503 100
A.thaliana ARLA1A 833747   NP_568553 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)