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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ict1, immature colon carcinoma transcript 1
Sequence ID:NM_026729
Entrez Gene ID:68572
Ensembl ID:ENSMUSG00000018858

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 115403765 - 115410913

NM_026729 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1108115265079115265186
109145115267864115267900
146205115270793115270852
206288115271373115271455
289458115271545115271714
459734115271951115272226

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2938122Full LengthBC028523immature colon carcinoma transcript 1
30361669IncompleteBC079614immature colon carcinoma transcript 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081005  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_026729 NP_081005   RF-1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC028523 AAH28523 Q8R035 EC 3.1.1.29
AK003192 BAB22632 Q8R035 EC 3.1.1.29
AK003286 BAB22691 Q8R035 EC 3.1.1.29
AK160697 BAE35961 Q8R035 EC 3.1.1.29

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ict1 NP_081005 R.norvegicus Ict1 303673   XP_221110 92
H.sapiens ICT1 3396 Gene Info NP_001536 80
A.gambiae AgaP_AGAP008425 1277552   XP_317020 49
D.melanogaster CG6094 34446   NP_609416 46
A.thaliana AT1G62850 842585   NP_001077760 40
C.elegans R02F2.9 259963   NP_498174 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)