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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Snx8, sorting nexin 8
Sequence ID:NM_172277
Entrez Gene ID:231834
Ensembl ID:ENSMUSG00000029560

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 140341478 - 140389239

 Exon Info From UCSC:
NM_172277

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5150754Full LengthBC037599sorting nexin 8

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_758481  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172277 NP_758481 Q8CFD4 PX

Related Sequences

 
mRNAGenPeptSwissProt
BC037599 AAH37599 Q8CFD4
AK045061 BAC32202 Q8CFD4
AK082871 BAC38662 Q8CFD4
AK148429 BAE28549 Q8CFD4
AK156817 BAE33864 Q3U0I9
AK161672 BAE36523 Q3TT02

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Snx8 NP_758481 R.norvegicus Snx8 288504   NP_001099382 98
H.sapiens SNX8 29886 Gene Info NP_037453 90
A.gambiae AgaP_AGAP012012 1280658   XP_320519 32
S.cerevisiae MVP1 855016   NP_013717 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)