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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. 2810407C02Rik, RIKEN cDNA 2810407C02 gene
Sequence ID:NM_001040396
Entrez Gene ID:69227
Ensembl ID:ENSMUSG00000075700

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 D|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 58576694 - 58591212

NM_001040396 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12165838057958380794
2173275838915258389262
3284545838987358389999
4555425839236758392454
5436965839408858394241
69735465839461658397465

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1547418Full LengthBC038867RIKEN cDNA 2810407C02 gene
4458171Full LengthBC019970RIKEN cDNA 2810407C02 gene
8861444Full LengthBC138424RIKEN cDNA 2810407C02 gene
40130730Full LengthBC132453RIKEN cDNA 2810407C02 gene
3979323IncompleteBC019936RIKEN cDNA 2810407C02 gene

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040396 NP_001035486    

Related Sequences

 
mRNAGenPeptSwissProt
BC019970 AAH19970 P62342
BC038867 AAH38867 P62342
BC132453 AAI32454 P62342
BC138424 AAI38425 P62342
AK017528 BAB30791 Q9CS90
AK013022 BAC55254 P62342
AK032838 BAC55259 P62342
AK047958 BAC55261 P62342

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus 2810407C02Rik NP_001035486 R.norvegicus Selt 365802   NP_001014275 100
H.sapiens SELT 51714 Gene Info NP_057359 99
A.gambiae AgaP_AGAP009202 1280163   XP_319979 42
D.melanogaster CG3887 33725   NP_608897 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)