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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Echdc2, enoyl Coenzyme A hydratase domain containing 2
Sequence ID:NM_001254754
NM_026728
Entrez Gene ID:52430
Ensembl ID:ENSMUSG00000028601

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C7|4 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 108165495 - 108179307

Transcript StartTranscript EndChromosomal Start Chromosomal End
1196107838070107838265
197264107842319107842386
265352107842465107842552
353439107844693107844779
440532107845484107845576
533589107846399107846455
590777107846591107846778
778828107849677107849727
829876107850975107851022
8771277107851511107851911

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3591648Full LengthBC025104enoyl Coenzyme A hydratase domain containing 2
5352625Full LengthBC025454enoyl Coenzyme A hydratase domain containing 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081004  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001254754 NP_001241683    
NM_026728 NP_081004 Q3TLP5 ECH

Related Sequences

 
mRNAGenPeptSwissProt
BC025104 AAH25104 Q3TLP5
BC025454 AAH25454 Q8R3H3
AK005030 BAB23757 Q3TLP5
AK153878 BAE32227 Q3TLP5
AK160482 BAE35813 Q3TLP5
AK166388 BAE38747 Q3TLP5
AK166965 BAE39148 Q3TLP5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Echdc2 NP_081004 R.norvegicus Echdc2 298381   NP_001100145 93
H.sapiens ECHDC2 55268 Gene Info NP_001185890 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)