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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hsph1, Heat shock 105kDa/110kDa protein 1
Sequence ID:NM_013559
Entrez Gene ID:15505
Ensembl ID:ENSMUSG00000029657

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G3|5 88.0

Chromosomal Position (from UCSC)

Chromosomal Position:5: 149616852 - 149625017

 Exon Info From UCSC:
NM_013559

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3257042Full LengthBC018378heat shock 105kDa/110kDa protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038587  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013559 NP_038587 Q61699 HSP70

Related Sequences

 
mRNAGenPeptSwissProt
L40406 AAA99485 Q61699
BC018378 AAH18378 Q61699
D67016 BAA11035 Q61699
D67017 BAA11036 Q61699
AK075731 BAC35915 Q8C6H1
AK083179 BAC38797 Q61699
AK172913 BAD32191 Q61699
AK146697 BAE27367 Q61699
AK165046 BAE38016 Q61699

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hsph1 NP_038587 R.norvegicus Hsph1 288444   NP_001011901 97
H.sapiens HSPH1 10808 Gene Info NP_006635 94
S.cerevisiae SSE2 852467   NP_009728 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)