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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Trip6, thyroid hormone receptor interactor 6
Sequence ID:NM_011639
Entrez Gene ID:22051
Ensembl ID:ENSMUSG00000023348

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G2|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 137309897 - 137314134

NM_011639 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1276137751126137751401
277397137751512137751632
398576137751880137752058
577746137753101137753270
747840137753367137753460
8411224137753933137754316
12251350137754578137754703
13511478137754808137754935
14791760137755187137755468

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861706Full LengthBC138685thyroid hormone receptor interactor 6
8861707Full LengthBC138686thyroid hormone receptor interactor 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035769  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011639 NP_035769 Q9Z1Y4 LIM

Related Sequences

 
mRNAGenPeptSwissProt
AF097511 AAC72380 Q9Z1Y4
AF116823 AAD45984 Q9Z1Y4
BC138685 AAI38686 B2RS30
BC138686 AAI38687 B2RS30
AK010435 BAB26937 Q9Z1Y4
AK159387 BAE35042 Q9Z1Y4
AK166024 BAE38527 Q3TMB5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trip6 NP_035769 H.sapiens TRIP6 7205 Gene Info NP_003293 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)