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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prodh2, proline dehydrogenase (oxidase) 2
Sequence ID:NM_019546
Entrez Gene ID:56189
Ensembl ID:ENSMUSG00000036892

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B1|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 30493670 - 30513046

NM_019546 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12003127867631278875
2013973127895031279146
3985363127923031279368
5376233127945631279542
6247043129123931291319
7058603129139531291550
86110273129162931291795
102811383129478531294895
113912243129615631296241
122518173129782831298420

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4161894Full LengthBC018182proline dehydrogenase (oxidase) 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_062419  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_019546 NP_062419 Q8VCZ9 EC 1.5.99.8 Pro_dh

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U80019 AAF21466 Q8VCZ9 EC 1.5.99.8
BC018182 AAH18182 Q8VCZ9 EC 1.5.99.8
BC052815 AAH52815    
AF222851 AAQ13907 Q8VCZ9 EC 1.5.99.8
AK050141 BAC34090 Q8VCZ9 EC 1.5.99.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prodh2 NP_062419 R.norvegicus Prodh2 361538   NP_001033677 93
H.sapiens PRODH2 58510 Gene Info NP_067055 81
A.thaliana ERD5 822833   NP_189701 31
A.thaliana AT5G38710 833862   NP_198687 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)