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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rufy3, RUN and FYVE domain containing 3
Sequence ID:NM_027530
Entrez Gene ID:52822
Ensembl ID:ENSMUSG00000029291

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5 48.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 88583512 - 88640927

 Exon Info From UCSC:
NM_027530

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4527858Full LengthBC017648RUN and FYVE domain containing 3
6469137Full LengthBC058259RUN and FYVE domain containing 3
6821567Full LengthBC049127RUN and FYVE domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081806  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027530 NP_081806 Q9D394 RUN

Related Sequences

 
mRNAGenPeptSwissProt
BC017648 AAH17648 Q9D394
BC049127 AAH49127 Q9D394
BC058259 AAH58259 Q9D394
AK018184 BAB31113 Q9D394
AK045610 BAC32436 Q8BLC2
AK083242 BAC38826 Q9D394
AK148795 BAE28665 Q9D394
AK154941 BAE32941 Q9D394
CT010404 CAJ18610 Q9D394

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rufy3 NP_081806 H.sapiens RUFY3 22902 Gene Info NP_001032519 99
R.norvegicus Rufy3 360921   NP_001020298 99
A.gambiae AgaP_AGAP003431 1272804   XP_558879 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)