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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gatad2a, GATA zinc finger domain containing 2A
Sequence ID:NM_001113345
NM_001113346
NM_145596
Entrez Gene ID:234366
Ensembl ID:ENSMUSG00000036180

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B3.3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 69908656 - 69909478

 Exon Info From UCSC:
NM_001113345
NM_001113346
NM_145596

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5321913Full LengthBC038221GATA zinc finger domain containing 2A

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001113345 NP_001106816 Q8CHY6  
NM_001113346 NP_001106817    
NM_145596 NP_663571    

Related Sequences

 
mRNAGenPeptSwissProt
BC019178 AAH19178 Q8CHY6
BC031407 AAH31407 Q8CHY6
BC038221 AAH38221 Q8CHY6
AK089074 BAC40736 Q8CHY6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gatad2a NP_663571 R.norvegicus Gatad2a 290669   NP_001013903 97
H.sapiens GATAD2A 54815 Gene Info NP_060130 89

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)