Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Ctcf, CCCTC-binding factor
Sequence ID:NM_181322
Entrez Gene ID:13018
Ensembl ID:ENSMUSG00000005698

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 105663762 - 105681619

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3982679Full LengthBC046398CCCTC-binding factor
6307925Full LengthBC058240CCCTC-binding factor
6825952Full LengthBC049131CCCTC-binding factor
4037752IncompleteBC037456CCCTC-binding factor
4981310IncompleteBC024382CCCTC-binding factor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_851839  

Protein Infomation

NM_181322 NP_851839 Q61164 zf-C2H2

Related Sequences

U51037 AAC52928 Q61164
BC024382 AAH24382 Q05CK6
BC037456 AAH37456 Q61164
BC046398 AAH46398 Q61164
BC049131 AAH49131 Q61164
BC058240 AAH58240 Q61164
AK076192 BAC36245 Q61164
AK132514 BAE21212 Q3UYZ8
AK133842 BAE21879 Q3UZH8
AK134247 BAE22063 Q3UYZ8
AK140164 BAE24263 Q3USR8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ctcf NP_851839 H.sapiens CTCF 10664 Gene Info NP_006556 99
R.norvegicus Ctcf 83726   NP_114012 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta