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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cbr1, carbonyl reductase 1
Sequence ID:NM_007620
Entrez Gene ID:12408
Ensembl ID:ENSMUSG00000051483

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 C4|16 67.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 93607908 - 93610337

NM_007620 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14189360808193608498
4195269360903393609140
52710819361003993610593

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4217206Full LengthBC012714carbonyl reductase 1
9088154Full LengthBC158026carbonyl reductase 1
9088155Full LengthBC158029carbonyl reductase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031646  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007620 NP_031646 P48758 EC 1.1.1.197
EC 1.1.1.184
EC 1.1.1.189
adh_short

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U31966 AAB19006 P48758 EC 1.1.1.197
EC 1.1.1.184
EC 1.1.1.189
BC012714 AAH12714 P48758 EC 1.1.1.197
EC 1.1.1.184
EC 1.1.1.189
BC158026 AAI58027 B2RXY7  
BC158029 AAI58030 B2RXY7  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cbr1 NP_031646 R.norvegicus Cbr1 29224   NP_062043 90
R.norvegicus LOC100360507 100360507   XP_002727909 89
H.sapiens CBR1 873 Gene Info NP_001748 88
A.thaliana AT5G61830 836305   NP_200991 40
A.thaliana AT5G51030 835176   NP_199916 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)