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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Csnk1a1, casein kinase 1, alpha 1
Sequence ID:NM_146087
Entrez Gene ID:93687
Ensembl ID:ENSMUSG00000024576

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 D3|18

Chromosomal Position (from UCSC)

Chromosomal Position:18: 61589212 - 61590054

NM_146087 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3487913Full LengthBC019740casein kinase 1, alpha 1
5038433Full LengthBC025439casein kinase 1, alpha 1
6309504Full LengthBC048081casein kinase 1, alpha 1
3486713IncompleteBC002171casein kinase 1, alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666199  

Protein Infomation

NM_146087 NP_666199 Q6PJ87   Pkinase

Related Sequences

BC002171 AAH02171 Q8BK63 EC
BC019740 AAH19740 Q6PJ87  
BC025439 AAH25439 Q6PJ87  
BC048081 AAH48081 Q8BK63 EC
AK076070 BAC36161 Q8BK63 EC
AK078398 BAC37255 Q8BK63 EC
AK146873 BAE27496 Q8BK63 EC
AK147165 BAE27730 Q6PJ87  
AK152387 BAE31175 Q3U844  
AK152793 BAE31499 Q3U772  
AK159939 BAE35497 Q3TVX1  
AK166318 BAE38701 Q6PJ87  
X90945 CAA62440 Q8BK63 EC

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Csnk1a1 NP_666199 H.sapiens CSNK1A1 1452 Gene Info NP_001020276 100
R.norvegicus Csnk1a1 113927   NP_446067 100
A.gambiae AgaP_AGAP000627 1271683   XP_310451 85
D.melanogaster CkIalpha 32221   NP_001162737 82
A.thaliana ckl8 834350   NP_199146 68
A.thaliana ckl10 821915   NP_188976 66
A.thaliana CKL13 839520   NP_171939 66
A.thaliana CKI1 827076   NP_193170 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta