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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Bloc1s6, biogenesis of organelles complex-1, subunit 6, pallidin
Sequence ID:NM_019788
Entrez Gene ID:18457
Ensembl ID:ENSMUSG00000005804

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E5|2 67.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 122738529 - 122748097

NM_019788 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1200122564240122564439
201342122568324122568465
343430122569861122569948
431517122571790122571876
5183494122572246122575222

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6437935Full LengthBC085260pallidin

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019788 NP_062762 Q9R0C0  

Related Sequences

 
mRNAGenPeptSwissProt
BC016554 AAH16554 Q9R0C0
BC085260 AAH85260 Q5U455
AK038381 BAC29977 Q9R0C0
AK077720 BAC36979 Q9R0C0
AK147116 BAE27688 Q9R0C0
AK160580 BAE35887 Q9R0C0
AK170964 BAE42145 Q5U455
AK172571 BAE43072 Q5U455

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pldn NP_062762 R.norvegicus Pldn 317630   NP_001020885 94
H.sapiens PLDN 26258 Gene Info NP_036520 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)