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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cplx2, complexin 2
Sequence ID:NM_009946
Entrez Gene ID:12890
Ensembl ID:ENSMUSG00000025867

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 B1|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 54371478 - 54378878

NM_009946 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12275447271254472938
2283465447994454480062
3475225448017554480350
52349255448087554485277

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100064048Full LengthBC160304complexin 2
6544937IncompleteBC048487complexin 2
6822801IncompleteBC058395complexin 2
6823407IncompleteBC059906complexin 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034076  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009946 NP_034076 P84086 Synaphin

Related Sequences

 
mRNAGenPeptSwissProt
BC160304 AAI60304  
D38613 BAA07604 P84086
BN000501 CAG26661 P84086
BN000502 CAG26662 P84086

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cplx2 NP_034076 H.sapiens CPLX2 10814 Gene Info NP_006641 100
R.norvegicus Cplx2 116657   NP_446330 100

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)