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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pdzd8, PDZ domain containing 8
Sequence ID:NM_001033222
Entrez Gene ID:107368
Ensembl ID:ENSMUSG00000074746

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 D3|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 59296675 - 59299746

NM_001033222 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
156255937057359376197
562657885937964759379809
578958915938974759389849
589260145940224059402362
601570765941920859420269

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055983Full LengthBC141370PDZ domain containing 8
9055984Full LengthBC141371PDZ domain containing 8
4951004IncompleteBC031591PDZ domain containing 8

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001033222 NP_001028394 Q3UMB1  
NM_172523 NP_766111 Q8BRU6 MFS_1

Related Sequences

 
mRNAGenPeptSwissProt
BC078449 AAH78449 Q66L40
BC141370 AAI41371 B9EJ80
BC141371 AAI41372 B9EJ80
AK033871 BAC28501 Q8BRU6
AK041274 BAC30887 Q8BRU6
AK145020 BAE26187 Q3UMB1
AJ555564 CAD88262 Q8BRU6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdzd8 NP_001028394 R.norvegicus Pdzd8 308000   NP_001100916 95
H.sapiens PDZD8 118987 Gene Info NP_776152 87
A.gambiae AgaP_AGAP002576 1273392   XP_312361 33
D.melanogaster CG10362 32157   NP_572771 30
C.elegans C53B4.4 177716   NP_001023093 29

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)