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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gjb5, gap junction protein, beta 5
Sequence ID:NM_010291
Entrez Gene ID:14622
Ensembl ID:ENSMUSG00000042357

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D2.2|4 57.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 127354808 - 127358164

NM_010291 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11565127032052127033616
15661704127035269127035407

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4207506Full LengthBC011148gap junction protein, beta 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034421  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010291 NP_034421 Q542M8
Q02739
Connexin

Related Sequences

 
mRNAGenPeptSwissProt
M91236 AAA37426 Q542M8
Q02739
BC011148 AAH11148 Q91XA4
AK082917 BAC38687 Q542M8
Q02739

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gjb5 NP_034421 R.norvegicus Gjb5 29586   NP_062114 93
H.sapiens GJB5 2709 Gene Info NP_005259 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)