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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tyms, thymidylate synthase
Sequence ID:NM_021288
NR_033402
Entrez Gene ID:22171
Ensembl ID:ENSMUSG00000025747

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B1|5 18.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 30060811 - 30073560

NM_021288 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
129343038473930387672
293530063038850730388578
300731823038977530389950
318332843039062430390725
328534593039500530395179
346035333039817330398246
353437983039990030400164

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3994204Full LengthBC020139thymidylate synthase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067263  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_021288 NP_067263 Q544L2
P07607
EC 2.1.1.45 Thymidylat_synt

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M13019 AAA40439 Q544L2
P07607
EC 2.1.1.45
BC020139 AAH20139 Q8VDV6  
AK011435 BAB27620 Q9D0H1  
AK035663 BAC29144 Q544L2
P07607
EC 2.1.1.45
AK088134 BAC40165 Q8C2R3  
AK088606 BAC40450 Q8C2H6  
X14489 CAA32651 P07607 EC 2.1.1.45

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tyms NP_067263 R.norvegicus Tyms 29261   NP_062052 97
H.sapiens TYMS 7298 Gene Info NP_001062 91
D.melanogaster Ts 33499   NP_477367 69
C.elegans Y110A7A.4 172149   NP_491532 68
A.gambiae AgaP_AGAP010457 1272582   XP_311491 67
A.thaliana THY-1 816134   NP_179230 66
S.cerevisiae CDC21 854241   NP_014717 66
A.thaliana THY-2 829609   NP_195183 65
N.crassa NCU10053 3874088   XP_957941 64
S.pombe SPAC15E1.04 2542801   NP_594305 61
P.falciparum PFD0805w 812524   XP_001351479 57
A.thaliana AT2G21550 816694   NP_179750 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)