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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cacna1h, calcium channel, voltage-dependent, T type, alpha 1H subunit
Sequence ID:NM_001163691
NM_021415
Entrez Gene ID:58226
Ensembl ID:ENSMUSG00000024112

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 A3.3|17 7.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 25374284 - 25377679

 Exon Info From UCSC:
NM_001163691
NM_021415

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861045Full LengthBC138026calcium channel, voltage-dependent, T type, alpha 1H subunit
5361450IncompleteBC058206calcium channel, voltage-dependent, T type, alpha 1H subunit

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_067390  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163691 NP_001157163    
NM_021415 NP_067390   Ion_trans
PKD_channel

Related Sequences

 
mRNAGenPeptSwissProt
AF051947 AAC67240 O88427
AF334706 AAG59899 Q99P43
BC058206 AAH58206 Q6PE92
BC138026 AAI38027 O88427
AB041801 BAA95112 Q9JJ85
AK043501 BAC31561 Q8BRT7
AK122452 BAC65734 O88427
AK135951 BAE22740 Q3UX23

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cacna1h NP_067390 R.norvegicus Cacna1h 114862   NP_722521 97
H.sapiens CACNA1H 8912 Gene Info NP_066921 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)