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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cbx4, chromobox 4
Sequence ID:NM_007625
Entrez Gene ID:12418
Ensembl ID:ENSMUSG00000039989

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11 79.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 119080156 - 119081247

NM_007625 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
174747118938884118943614
47484814118943830118943896
48154880118945876118945941
48814924118947070118947113
49255213118947262118947550

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40092282Full LengthBC117801chromobox homolog 4 (Drosophila Pc class)
40092283Full LengthBC117802chromobox homolog 4 (Drosophila Pc class)
6441997IncompleteBC045162chromobox homolog 4 (Drosophila Pc class)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031651  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007625 NP_031651 O55187 Chromo

Related Sequences

 
mRNAGenPeptSwissProt
U63387 AAB96874 O55187
BC045162 AAH45162 Q05BI5
BC117801 AAI17802 O55187
BC117802 AAI17803 O55187
AK040138 BAC30519 Q8C9Z5
AK155512 BAE33302 Q3U240

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cbx4 NP_031651 R.norvegicus Cbx4 501403   XP_576815 98
H.sapiens CBX4 8535 Gene Info NP_003646 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta