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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sytl2, synaptotagmin-like 2
Sequence ID:NM_001040085
NM_001040086
NM_001040087
NM_001040088
NM_031394
Entrez Gene ID:83671
Ensembl ID:ENSMUSG00000030616

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 E1|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 90387441 - 90409555

 Exon Info From UCSC:
NM_001040085
NM_001040086
NM_001040087
NM_001040088
NM_031394

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861736Full LengthBC138714synaptotagmin-like 2
9053956Full LengthBC145398synaptotagmin-like 2
6840999IncompleteBC060665synaptotagmin-like 2
30068847IncompleteBC064769synaptotagmin-like 2
30069350IncompleteBC052915synaptotagmin-like 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_113571  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001040085 NP_001035174    
NM_001040086 NP_001035175    
NM_001040087 NP_001035176    
NM_001040088 NP_001035177    
NM_031394 NP_113571 Q99N50 C2

Related Sequences

 
mRNAGenPeptSwissProt
BC052915 AAH52915 Q7TMU6
BC064769 AAH64769 Q6P216
BC138714 AAI38715 Q99N50
BC145398 AAI45399 Q99N50
AB050742 BAB32652 Q99N50
AB057754 BAB41082 Q99N50
AB057755 BAB41083 Q99N50
AB057756 BAB41084 Q99N50
AB057757 BAB41085 Q99N50
AB057760 BAB41088 Q99N50
AB057761 BAB41089 Q99N50
AB057762 BAB41090 Q99N50
AB057763 BAB41091 Q99N50
AK173212 BAD32490 Q69ZF4
AK162921 BAE37116 Q3TRB4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sytl2 NP_001035174 R.norvegicus Sytl2 361604   NP_001101962 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)