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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Acsl6, acyl-CoA synthetase long-chain family member 6
Sequence ID:NM_001033597
NM_001033598
NM_001033599
NM_144823
Entrez Gene ID:216739
Ensembl ID:ENSMUSG00000020333

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11 29.35 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 54320177 - 54361546

 Exon Info From UCSC:
NM_001033597
NM_001033598
NM_001033599
NM_144823

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4481949Full LengthBC016114acyl-CoA synthetase long-chain family member 6
5362660Full LengthBC022959acyl-CoA synthetase long-chain family member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_659072  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001033597 NP_001028769      
NM_001033598 NP_001028770 Q91WC3 EC 6.2.1.3  
NM_001033599 NP_001028771 Q8R1X1    
NM_144823 NP_659072     AMP-binding

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC016114 AAH16114 Q91WC3 EC 6.2.1.3
BC022959 AAH22959 Q8R1X1  
AY167035 AAO38689 Q91WC3 EC 6.2.1.3
AY786360 AAW33883 Q5ICG5
Q8R1X1
 
AY786361 AAW33884 Q5ICG6  
AY786362 AAW33885 Q5ICG5
Q8R1X1
 
AY786363 AAW33886 Q5ICG4
Q91WC3
EC 6.2.1.3
AK032479 BAC27892 Q8C028  
AK039380 BAC30332 Q8BYJ0  
AK122384 BAC65666 Q80TQ7  
AK147283 BAE27819 Q5ICG4
Q91WC3
EC 6.2.1.3
AK147421 BAE27902 Q5F2D0  
AB073974 BAF82006 A8IP90  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Acsl6 NP_001028769 R.norvegicus Acsl6 117243   NP_570095 97
H.sapiens ACSL6 23305 Gene Info NP_056071 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)