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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Apoa1, apolipoprotein A-I
Sequence ID:NM_009692
Entrez Gene ID:11806
Ensembl ID:ENSMUSG00000032083

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A2-A4|9 27.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:9: 46228708 - 46230457

NM_009692 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4195624Full LengthBC012253apolipoprotein A-I
5123746Full LengthBC019837apolipoprotein A-I
5126143Full LengthBC091745apolipoprotein A-I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033822  

Protein Infomation

NM_009692 NP_033822 Q00623 Apolipoprotein

Related Sequences

BC012253 AAH12253 Q00623
BC019837 AAH19837 Q00623
BC091745 AAH91745 Q58EV2
AK076187 BAC36241 Q00623
AK131864 BAE20837 Q3V2G1
AK149576 BAE28968 Q00623
AK161536 BAE36448 Q00623
X64262 CAA45560 Q00623

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Apoa1 NP_033822 H.sapiens APOA1 335 Gene Info NP_000030 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)