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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hp, haptoglobin
Sequence ID:NM_017370
Entrez Gene ID:15439
Ensembl ID:ENSMUSG00000031722

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 D3|8 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 109575129 - 109579064

NM_017370 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
21942112099027112099948
9431017112100604112100678
10181119112101029112101130
11201202112101379112101461
12031365112102909112103071

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861894Full LengthBC138872haptoglobin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059066  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_017370 NP_059066 Q3UBS3
Q61646
Trypsin

Related Sequences

 
mRNAGenPeptSwissProt
M96827 AAA37779 Q3UBS3
Q61646
S67972 AAB29697  
BC138872 AAI38873 Q3UBS3
AK150430 BAE29553 Q3UBS3
Q61646
AK150830 BAE29891 Q3UBS3
Q61646
AK152295 BAE31104 Q3UBS3
Q61646
AK152698 BAE31428 Q3UBS3
Q61646
AK159676 BAE35279 Q3UBS3
Q61646

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hp NP_059066 R.norvegicus Hp 24464   NP_036714 90
H.sapiens HP 3240 Gene Info NP_001119574 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)