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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lim2, lens intrinsic membrane protein 2
Sequence ID:NM_177693
Entrez Gene ID:233187
Ensembl ID:ENSMUSG00000004613

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B4|7 2.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 43430100 - 43435991

NM_177693 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1565068547050685525
572375068595450686134
2383875068893750689086
3885225069067550690809
5238665069101750691360

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8734002Full LengthBC119253lens intrinsic membrane protein 2
8734004Full LengthBC119255lens intrinsic membrane protein 2
30551056Full LengthBC092386lens intrinsic membrane protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808361  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177693 NP_808361 P56563 PMP22_Claudin

Related Sequences

 
mRNAGenPeptSwissProt
BC092386 AAH92386 Q569M6
BC119253 AAI19254 P56563
BC119255 AAI19256 P56563
AK029354 BAC26414 P56563
AK145594 BAE26530 Q3ULB9
AK164958 BAE37979 P56563

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lim2 NP_808361 R.norvegicus Lim2 114903   NP_446223 99
H.sapiens LIM2 3982 Gene Info NP_001155220 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)