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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pck1, phosphoenolpyruvate carboxykinase 1, cytosolic
Sequence ID:NM_011044
Entrez Gene ID:18534
Ensembl ID:ENSMUSG00000027513

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 C1-qter|2 103.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 173153072 - 173159270

NM_011044 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
199172978573172978671
100364172978848172979112
365546172979435172979616
547750172980201172980404
751938172980677172980864
9391101172981438172981600
11021326172982412172982636
13271458172982729172982860
14591554172983493172983588
15552616172983692172984753

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4973187Full LengthBC037629phosphoenolpyruvate carboxykinase 1, cytosolic

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035174  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011044 NP_035174 Q9Z2V4 EC 4.1.1.32 PEPCK

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC037629 AAH37629 Q8CI37  
AK028046 BAC25718 Q9Z2V4 EC 4.1.1.32
AK030327 BAC26903 Q8BSX3  
AK133496 BAE21687 Q9Z2V4 EC 4.1.1.32
AK149525 BAE28938 Q9Z2V4 EC 4.1.1.32

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pck1 NP_035174 R.norvegicus Pck1 362282   NP_942075 98
H.sapiens PCK1 5105 Gene Info NP_002582 91
D.melanogaster CG10924 37130   NP_611341 66

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)