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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Exosc10, exosome component 10
Sequence ID:NM_016699
Entrez Gene ID:50912
Ensembl ID:ENSMUSG00000017264

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 E2|4

Chromosomal Position (from UCSC)

Chromosomal Position:4: 148558457 - 148582397

 Exon Info From UCSC:
NM_016699

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3987812Full LengthBC027326exosome component 10
5325071Full LengthBC027840exosome component 10
3487633IncompleteBC003952exosome component 10

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057908  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016699 NP_057908 Q3UNK6
P56960
HRDC
3_5_exonuc
PMC2NT

Related Sequences

 
mRNAGenPeptSwissProt
AF091392 AAF01779 Q3UNK6
P56960
BC003952 AAH03952 Q99KY7
BC027326 AAH27326 Q8R2R0
BC027840 AAH27840 Q8K366
AK008444 BAB25673 Q9CVF6
AK017621 BAB30844 Q9CYJ3
AK144162 BAE25741 Q3UNK6
P56960
AK162887 BAE37100 Q3TRD0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Exosc10 NP_057908 H.sapiens EXOSC10 5394 Gene Info NP_001001998 87
A.thaliana AT1G54440 841886   NP_175846 51
D.melanogaster Rrp6 41798   NP_001097795 40
A.gambiae AgaP_AGAP002300 1273667   XP_312669 37
A.thaliana AT5G35910 833577   NP_198440 35
C.elegans crn-3 3565889   NP_496283 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)